Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm18766-201ENSMUST00000189811 808 ntBASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga11Q91XY8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm2445-201ENSMUST00000182798 989 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm27430-201ENSMUST00000184585 107 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm29541-201ENSMUST00000191351 678 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm44333-201ENSMUST00000197168 107 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm18027-201ENSMUST00000218947 619 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms