Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm24694-201ENSMUST00000180054 110 ntBASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm27663-201ENSMUST00000184839 110 ntBASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gm6916-202ENSMUST00000205523 195 ntBASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga4Q91XY4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga4Q91XY4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga4Q91XY4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga4Q91XY4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhga4Q91XY4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms