Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx41Q91VN6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Acot6-202ENSMUST00000222921 3622 ntBASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm12138-201ENSMUST00000122180 951 ntBASIC15.82■□□□□ 0.12
Ddx41Q91VN6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm9908-201ENSMUST00000211534 448 ntBASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx41Q91VN6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gm12091-201ENSMUST00000146791 830 ntBASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gm21470-201ENSMUST00000187680 696 ntBASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gm18624-201ENSMUST00000220966 658 ntBASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ddx41Q91VN6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms