Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
StrcQ8VIM6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.99■□□□□ 0.15
StrcQ8VIM6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.99■□□□□ 0.15
StrcQ8VIM6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.99■□□□□ 0.15
StrcQ8VIM6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
StrcQ8VIM6 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.99■□□□□ 0.15
StrcQ8VIM6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.98■□□□□ 0.15
StrcQ8VIM6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.98■□□□□ 0.15
StrcQ8VIM6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.98■□□□□ 0.15
StrcQ8VIM6 Gm26361-201ENSMUST00000158868 186 ntBASIC15.98■□□□□ 0.15
StrcQ8VIM6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Gm44545-201ENSMUST00000208262 746 ntBASIC15.98■□□□□ 0.15
StrcQ8VIM6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
StrcQ8VIM6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.97■□□□□ 0.15
StrcQ8VIM6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gm37201-201ENSMUST00000191845 523 ntBASIC15.97■□□□□ 0.15
StrcQ8VIM6 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.97■□□□□ 0.15
StrcQ8VIM6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
StrcQ8VIM6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm13736-201ENSMUST00000119272 253 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm10051-201ENSMUST00000145209 414 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm7593-201ENSMUST00000187246 644 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.96■□□□□ 0.15
StrcQ8VIM6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms