Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.39□□□□□ -0.43
Odf4Q8VI88 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Odf4Q8VI88 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Mir8102-201ENSMUST00000184148 139 ntBASIC12.38□□□□□ -0.43
Odf4Q8VI88 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.38□□□□□ -0.43
Odf4Q8VI88 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.38□□□□□ -0.43
Odf4Q8VI88 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Odf4Q8VI88 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gm5866-201ENSMUST00000177881 973 ntBASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gm18766-201ENSMUST00000189811 808 ntBASIC12.37□□□□□ -0.43
Odf4Q8VI88 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Odf4Q8VI88 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.36□□□□□ -0.43
Odf4Q8VI88 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Odf4Q8VI88 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms