Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.25□□□□□ -0.13
Trim60Q8VI40 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Mir6990-201ENSMUST00000183724 91 ntBASIC14.25□□□□□ -0.13
Trim60Q8VI40 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim60Q8VI40 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.25□□□□□ -0.13
Trim60Q8VI40 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim60Q8VI40 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.25□□□□□ -0.13
Trim60Q8VI40 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Mir698-201ENSMUST00000102164 109 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm13365-201ENSMUST00000121188 973 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm18766-201ENSMUST00000189811 808 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Gm43125-201ENSMUST00000201724 730 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.24□□□□□ -0.13
Trim60Q8VI40 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim60Q8VI40 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Dupd1-202ENSMUST00000224735 548 ntBASIC14.23□□□□□ -0.13
Trim60Q8VI40 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim60Q8VI40 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms