Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm11478-201ENSMUST00000117851 599 ntBASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm11918-201ENSMUST00000121660 179 ntBASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm5279-201ENSMUST00000199575 745 ntBASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc1Q8VCB1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc1Q8VCB1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Gm12341-201ENSMUST00000119724 503 ntBASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms