Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm10576-201ENSMUST00000191927 825 ntBASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpap2Q8VC34 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gm16215-201ENSMUST00000161990 637 ntBASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpap2Q8VC34 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpap2Q8VC34 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.08■□□□□ 0.01
Rpap2Q8VC34 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rpap2Q8VC34 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpap2Q8VC34 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms