Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Gm6415-201ENSMUST00000118488 348 ntBASIC13.81□□□□□ -0.2
Vps39Q8R5L3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.81□□□□□ -0.2
Vps39Q8R5L3 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps39Q8R5L3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Gm15693-201ENSMUST00000120470 637 ntBASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Gm6736-201ENSMUST00000166583 948 ntBASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps39Q8R5L3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.79□□□□□ -0.2
Vps39Q8R5L3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Gm28630-201ENSMUST00000187806 498 ntBASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms