Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdt1Q8R4E9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Gm8584-201ENSMUST00000171982 758 ntBASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdt1Q8R4E9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Gm17150-201ENSMUST00000165577 381 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdt1Q8R4E9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdt1Q8R4E9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms