Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm9103-201ENSMUST00000119371 405 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm12882-201ENSMUST00000121696 517 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm27628-201ENSMUST00000184911 107 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.37□□□□□ -0.43
Ccdc58Q8R3Q6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm5177-201ENSMUST00000183092 997 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm27301-201ENSMUST00000184012 127 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc58Q8R3Q6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms