Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zcchc9Q8R1J3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Zcchc9Q8R1J3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zcchc9Q8R1J3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zcchc9Q8R1J3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms