Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx54Q8K4L0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.89■□□□□ 0.46
Ddx54Q8K4L0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ddx54Q8K4L0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ddx54Q8K4L0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Gm14726-201ENSMUST00000120623 896 ntBASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Gm30285-201ENSMUST00000214614 422 ntBASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx54Q8K4L0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx54Q8K4L0 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx54Q8K4L0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx54Q8K4L0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx54Q8K4L0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx54Q8K4L0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ddx54Q8K4L0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms