Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc38Q8CDN8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gm8410-201ENSMUST00000117225 605 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gm15460-201ENSMUST00000118147 391 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gm6736-201ENSMUST00000166583 948 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gm25144-201ENSMUST00000179561 110 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gm25352-201ENSMUST00000179815 110 ntBASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc38Q8CDN8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm23935-201ENSMUST00000102303 57 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm24270-201ENSMUST00000102326 57 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm24245-201ENSMUST00000157318 57 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc38Q8CDN8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Mir698-201ENSMUST00000102164 109 ntBASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Gm9229-201ENSMUST00000222777 126 ntBASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc38Q8CDN8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc38Q8CDN8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc38Q8CDN8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc38Q8CDN8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms