Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim9Q8C7M3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim9Q8C7M3 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Gm9522-201ENSMUST00000182394 926 ntBASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Gm18905-201ENSMUST00000205454 928 ntBASIC15.19■□□□□ 0.02
Trim9Q8C7M3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim9Q8C7M3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gm29667-201ENSMUST00000190817 490 ntBASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim9Q8C7M3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms