Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Eri3Q8C460 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Eri3Q8C460 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eri3Q8C460 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.11□□□□□ -0.31
Eri3Q8C460 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eri3Q8C460 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Acot6-202ENSMUST00000222921 3622 ntBASIC13.1□□□□□ -0.31
Eri3Q8C460 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Gm29667-201ENSMUST00000190817 490 ntBASIC13.1□□□□□ -0.31
Eri3Q8C460 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.1□□□□□ -0.31
Eri3Q8C460 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.1□□□□□ -0.31
Eri3Q8C460 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eri3Q8C460 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.1□□□□□ -0.31
Eri3Q8C460 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eri3Q8C460 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Eri3Q8C460 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Eri3Q8C460 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Gm6912-201ENSMUST00000117218 544 ntBASIC13.09□□□□□ -0.31
Eri3Q8C460 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.09□□□□□ -0.31
Eri3Q8C460 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.09□□□□□ -0.31
Eri3Q8C460 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Eri3Q8C460 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Eri3Q8C460 Syt7-204ENSMUST00000223586 1344 ntBASIC13.09□□□□□ -0.31
Eri3Q8C460 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.09□□□□□ -0.31
Eri3Q8C460 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eri3Q8C460 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Eri3Q8C460 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Eri3Q8C460 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Eri3Q8C460 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.08□□□□□ -0.31
Eri3Q8C460 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Eri3Q8C460 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Eri3Q8C460 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Eri3Q8C460 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Eri3Q8C460 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Eri3Q8C460 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.08□□□□□ -0.32
Eri3Q8C460 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Gm24694-201ENSMUST00000180054 110 ntBASIC13.08□□□□□ -0.32
Eri3Q8C460 Gm27663-201ENSMUST00000184839 110 ntBASIC13.08□□□□□ -0.32
Eri3Q8C460 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Eri3Q8C460 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms