Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Gm19309-201ENSMUST00000218295 205 ntBASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Gm3222-201ENSMUST00000071282 990 ntBASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Ptcd1Q8C2E4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Gm11803-201ENSMUST00000119966 444 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Gm24420-201ENSMUST00000176676 59 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Gm19891-201ENSMUST00000189771 303 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Gm38223-201ENSMUST00000194484 695 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ptcd1Q8C2E4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm27772-201ENSMUST00000184900 187 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ptcd1Q8C2E4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Mir3547-201ENSMUST00000175461 88 ntBASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.9■□□□□ 0.3
Ptcd1Q8C2E4 Gm7783-201ENSMUST00000204795 781 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms