Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab11fip4Q8BQP8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.28■□□□□ 0.04
Rab11fip4Q8BQP8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Gm9522-201ENSMUST00000182394 926 ntBASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.27■□□□□ 0.04
Rab11fip4Q8BQP8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rab11fip4Q8BQP8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab11fip4Q8BQP8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.25■□□□□ 0.03
Rab11fip4Q8BQP8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms