Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Mir6979-201ENSMUST00000183927 56 ntBASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Gm2260-201ENSMUST00000184965 657 ntBASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col16a1Q8BLX7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm14017-201ENSMUST00000121934 386 ntBASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col16a1Q8BLX7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm14726-201ENSMUST00000120623 896 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Mir5120-201ENSMUST00000175020 78 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm30285-201ENSMUST00000214614 422 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 B9d1os-201ENSMUST00000137010 674 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 Gm37986-201ENSMUST00000193285 383 ntBASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col16a1Q8BLX7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms