Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf38Q8BI21 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Gm43575-201ENSMUST00000196420 516 ntBASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf38Q8BI21 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm23935-201ENSMUST00000102303 57 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm24270-201ENSMUST00000102326 57 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm24245-201ENSMUST00000157318 57 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm18766-201ENSMUST00000189811 808 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Gm45453-201ENSMUST00000211758 853 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Mir125a-201ENSMUST00000083545 68 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf38Q8BI21 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms