Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm27300-201ENSMUST00000184085 97 ntBASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm27335-201ENSMUST00000184758 97 ntBASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm13597-201ENSMUST00000121239 375 ntBASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm17807-201ENSMUST00000186869 298 ntBASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc5a7Q8BGY9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Gm15483-201ENSMUST00000120338 456 ntBASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms