Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Samm50Q8BGH2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm14767-201ENSMUST00000121559 586 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm27533-201ENSMUST00000183800 152 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Samm50Q8BGH2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Gm27631-201ENSMUST00000184163 466 ntBASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Samm50Q8BGH2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Samm50Q8BGH2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms