Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Gm4804-201ENSMUST00000182234 999 ntBASIC13.61□□□□□ -0.23
Ubp1Q811S7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.61□□□□□ -0.23
Ubp1Q811S7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubp1Q811S7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubp1Q811S7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
Ubp1Q811S7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Mir6977-201ENSMUST00000184960 64 ntBASIC13.6□□□□□ -0.23
Ubp1Q811S7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.6□□□□□ -0.23
Ubp1Q811S7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.6□□□□□ -0.23
Ubp1Q811S7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.6□□□□□ -0.23
Ubp1Q811S7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.6□□□□□ -0.23
Ubp1Q811S7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubp1Q811S7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm15321-201ENSMUST00000121290 288 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm8927-201ENSMUST00000181978 981 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Gm3222-201ENSMUST00000071282 990 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.59□□□□□ -0.23
Ubp1Q811S7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms