Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ush1gQ80T11 Gm10478-201ENSMUST00000084451 396 ntBASIC15.05■□□□□ -0
Ush1gQ80T11 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ush1gQ80T11 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.05■□□□□ -0
Ush1gQ80T11 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1gQ80T11 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Ush1gQ80T11 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ush1gQ80T11 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.04■□□□□ -0
Ush1gQ80T11 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ush1gQ80T11 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Ush1gQ80T11 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm11524-201ENSMUST00000119349 807 ntBASIC15.04■□□□□ -0
Ush1gQ80T11 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.04■□□□□ -0
Ush1gQ80T11 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm7287-201ENSMUST00000205267 602 ntBASIC15.04■□□□□ -0
Ush1gQ80T11 Gm19078-201ENSMUST00000206311 727 ntBASIC15.04■□□□□ -0
Ush1gQ80T11 Gm8463-201ENSMUST00000208573 613 ntBASIC15.04■□□□□ -0
Ush1gQ80T11 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.04■□□□□ -0
Ush1gQ80T11 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ush1gQ80T11 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ush1gQ80T11 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1gQ80T11 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm12928-201ENSMUST00000117115 573 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Gm13392-201ENSMUST00000117708 150 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm8062-201ENSMUST00000139696 444 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm27847-201ENSMUST00000183711 107 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Gm27375-201ENSMUST00000183799 107 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
Ush1gQ80T11 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.03■□□□□ -0
Ush1gQ80T11 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.03■□□□□ -0
Ush1gQ80T11 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms