Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.9□□□□□ -0.19
Nudcd1Q6PIP5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.9□□□□□ -0.19
Nudcd1Q6PIP5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Gm11524-201ENSMUST00000119349 807 ntBASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nudcd1Q6PIP5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Mir698-201ENSMUST00000102164 109 ntBASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nudcd1Q6PIP5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.87□□□□□ -0.19
Nudcd1Q6PIP5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms