Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm26083-201ENSMUST00000157904 193 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm25927-201ENSMUST00000175058 117 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm29199-201ENSMUST00000187766 775 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm37922-201ENSMUST00000195596 455 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Olfr284-202ENSMUST00000206647 966 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.06□□□□□ -0.48
Snrnp40Q6PE01 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Mir877-201ENSMUST00000104738 85 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm12241-201ENSMUST00000118330 726 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms