Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf220Q6PDX6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gm17971-201ENSMUST00000190239 806 ntBASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gm10060-201ENSMUST00000212002 111 ntBASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf220Q6PDX6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf220Q6PDX6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm7153-201ENSMUST00000117092 455 ntBASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms