Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.32■□□□□ 0.04
Trim37Q6PCX9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gm38241-201ENSMUST00000192641 898 ntBASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gm7399-201ENSMUST00000032395 858 ntBASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim37Q6PCX9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm12585-201ENSMUST00000117307 290 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm26461-201ENSMUST00000175064 290 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm18307-201ENSMUST00000206864 949 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm18056-201ENSMUST00000207670 568 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm18061-201ENSMUST00000208350 562 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm18063-201ENSMUST00000208529 568 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Gm18052-201ENSMUST00000208750 559 ntBASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim37Q6PCX9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Gm15236-201ENSMUST00000117309 379 ntBASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.3■□□□□ 0.04
Trim37Q6PCX9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms