Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm2445-201ENSMUST00000182798 989 ntBASIC14.52□□□□□ -0.09
Scube3Q66PY1 Gm5279-201ENSMUST00000199575 745 ntBASIC14.52□□□□□ -0.09
Scube3Q66PY1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scube3Q66PY1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Gm14127-201ENSMUST00000117906 678 ntBASIC14.5□□□□□ -0.09
Scube3Q66PY1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Scube3Q66PY1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scube3Q66PY1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scube3Q66PY1 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.49□□□□□ -0.09
Scube3Q66PY1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scube3Q66PY1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scube3Q66PY1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms