Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm24644-201ENSMUST00000157114 139 ntBASIC17.42■□□□□ 0.38
Clcn1Q64347 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.42■□□□□ 0.38
Clcn1Q64347 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.42■□□□□ 0.38
Clcn1Q64347 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.41■□□□□ 0.38
Clcn1Q64347 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm8810-201ENSMUST00000172895 754 ntBASIC17.41■□□□□ 0.38
Clcn1Q64347 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm44397-201ENSMUST00000195950 113 ntBASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.41■□□□□ 0.38
Clcn1Q64347 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.41■□□□□ 0.38
Clcn1Q64347 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn1Q64347 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn1Q64347 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.4■□□□□ 0.38
Clcn1Q64347 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.4■□□□□ 0.38
Clcn1Q64347 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.4■□□□□ 0.38
Clcn1Q64347 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.4■□□□□ 0.38
Clcn1Q64347 Gm9823-201ENSMUST00000051212 327 ntBASIC17.4■□□□□ 0.38
Clcn1Q64347 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn1Q64347 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clcn1Q64347 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Clcn1Q64347 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.39■□□□□ 0.38
Clcn1Q64347 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Clcn1Q64347 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm27772-201ENSMUST00000184900 187 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm38223-201ENSMUST00000194484 695 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Gm43179-201ENSMUST00000198797 275 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.39■□□□□ 0.37
Clcn1Q64347 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn1Q64347 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms