Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Gm12566-201ENSMUST00000121479 359 ntBASIC15.91■□□□□ 0.14
Scn9aQ62205 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.91■□□□□ 0.14
Scn9aQ62205 Gm24514-201ENSMUST00000174961 285 ntBASIC15.91■□□□□ 0.14
Scn9aQ62205 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn9aQ62205 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Scn9aQ62205 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Scn9aQ62205 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.9■□□□□ 0.14
Scn9aQ62205 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Scn9aQ62205 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn9aQ62205 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Scn9aQ62205 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Scn9aQ62205 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm26185-201ENSMUST00000157692 266 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm28693-202ENSMUST00000190758 331 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm37042-201ENSMUST00000193816 581 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm13570-201ENSMUST00000140763 309 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm18212-201ENSMUST00000211678 889 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn9aQ62205 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.89■□□□□ 0.13
Scn9aQ62205 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn9aQ62205 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn9aQ62205 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Gm8959-201ENSMUST00000213150 571 ntBASIC15.88■□□□□ 0.13
Scn9aQ62205 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.88■□□□□ 0.13
Scn9aQ62205 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Scn9aQ62205 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn9aQ62205 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn9aQ62205 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms