Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.91□□□□□ -0.34
Sox17Q61473 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Sox17Q61473 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.91□□□□□ -0.34
Sox17Q61473 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox17Q61473 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox17Q61473 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox17Q61473 Gm13884-201ENSMUST00000118103 829 ntBASIC12.9□□□□□ -0.34
Sox17Q61473 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.9□□□□□ -0.34
Sox17Q61473 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox17Q61473 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sox17Q61473 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
Sox17Q61473 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox17Q61473 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.9□□□□□ -0.34
Sox17Q61473 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox17Q61473 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sox17Q61473 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.9□□□□□ -0.35
Sox17Q61473 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Gm15957-201ENSMUST00000118893 974 ntBASIC12.89□□□□□ -0.35
Sox17Q61473 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.89□□□□□ -0.35
Sox17Q61473 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox17Q61473 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Gm7977-201ENSMUST00000193787 748 ntBASIC12.89□□□□□ -0.35
Sox17Q61473 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox17Q61473 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.89□□□□□ -0.35
Sox17Q61473 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.89□□□□□ -0.35
Sox17Q61473 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox17Q61473 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox17Q61473 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms