Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Spcs1-203ENSMUST00000226374 592 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.29□□□□□ -0.28
Col12a1Q60847 Gm25517-201ENSMUST00000083865 134 ntBASIC13.29□□□□□ -0.28
Col12a1Q60847 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.29□□□□□ -0.28
Col12a1Q60847 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col12a1Q60847 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm25700-201ENSMUST00000177693 110 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm26956-201ENSMUST00000182176 986 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Col12a1Q60847 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.28□□□□□ -0.28
Col12a1Q60847 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.28□□□□□ -0.28
Col12a1Q60847 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm5070-201ENSMUST00000177599 862 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.28□□□□□ -0.28
Col12a1Q60847 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.28□□□□□ -0.28
Col12a1Q60847 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col12a1Q60847 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Col12a1Q60847 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col12a1Q60847 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.27□□□□□ -0.28
Col12a1Q60847 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms