Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Scn2bQ56A07 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn2bQ56A07 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn2bQ56A07 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm22175-201ENSMUST00000175007 78 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.64□□□□□ -0.23
Scn2bQ56A07 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn2bQ56A07 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Mir6956-201ENSMUST00000183598 62 ntBASIC13.63□□□□□ -0.23
Scn2bQ56A07 Gm44872-201ENSMUST00000207864 420 ntBASIC13.63□□□□□ -0.23
Scn2bQ56A07 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn2bQ56A07 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms