Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm4984-201ENSMUST00000115987 360 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm11814-201ENSMUST00000119515 929 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm43438-201ENSMUST00000198133 379 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm44719-201ENSMUST00000206404 149 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm18062-201ENSMUST00000208020 547 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm18055-201ENSMUST00000208254 547 ntBASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38aQ4FK66 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Gm15770-201ENSMUST00000117498 584 ntBASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Gm17330-201ENSMUST00000221047 165 ntBASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38aQ4FK66 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm8652-201ENSMUST00000181363 964 ntBASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Mir7085-201ENSMUST00000184353 66 ntBASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38aQ4FK66 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38aQ4FK66 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Prpf38aQ4FK66 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms