Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Bbof1Q3V079 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Shd-206ENSMUST00000225145 998 ntBASIC15.15■□□□□ 0.02
Bbof1Q3V079 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Bbof1Q3V079 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Bbof1Q3V079 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 BC001981-202ENSMUST00000191393 1545 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Gm46209-201ENSMUST00000217912 553 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.14■□□□□ 0.01
Bbof1Q3V079 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Bbof1Q3V079 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm27680-201ENSMUST00000184192 160 ntBASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.13■□□□□ 0.01
Bbof1Q3V079 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.13■□□□□ 0.01
Bbof1Q3V079 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Bbof1Q3V079 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Bbof1Q3V079 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Bbof1Q3V079 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Bbof1Q3V079 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Bbof1Q3V079 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms