Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm12882-201ENSMUST00000121696 517 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm2445-201ENSMUST00000182798 989 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trim40Q3UWA4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim40Q3UWA4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms