Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Gm21769-201ENSMUST00000211922 111 ntBASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Arhgef40Q3UPH7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Arhgef40Q3UPH7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Arhgef40Q3UPH7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Arhgef40Q3UPH7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Arhgef40Q3UPH7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Gm19163-201ENSMUST00000223313 780 ntBASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Arhgef40Q3UPH7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Arhgef40Q3UPH7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Gm20482-202ENSMUST00000174729 825 ntBASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Gm27341-201ENSMUST00000183570 106 ntBASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Gm5781-201ENSMUST00000219792 443 ntBASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Arhgef40Q3UPH7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Arhgef40Q3UPH7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms