Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Gm11745-201ENSMUST00000121669 448 ntBASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm20553-201ENSMUST00000204205 844 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm45098-201ENSMUST00000207179 657 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Chchd1-203ENSMUST00000224633 557 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf149Q3U2C5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm13365-201ENSMUST00000121188 973 ntBASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm18057-201ENSMUST00000208220 503 ntBASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf149Q3U2C5 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms