Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nhej1Q3KNJ2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm25287-201ENSMUST00000103846 110 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm22918-201ENSMUST00000103855 110 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mir1895-201ENSMUST00000122615 79 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nhej1Q3KNJ2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Gm13365-201ENSMUST00000121188 973 ntBASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nhej1Q3KNJ2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms