Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.31□□□□□ -0.6
Trim63Q38HM4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Gm10602-201ENSMUST00000098239 609 ntBASIC11.31□□□□□ -0.6
Trim63Q38HM4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm8825-201ENSMUST00000182565 998 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm4518-201ENSMUST00000182638 718 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.3□□□□□ -0.6
Trim63Q38HM4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim63Q38HM4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms