Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm18204-201ENSMUST00000209835 793 ntBASIC12.19□□□□□ -0.46
Chd8Q09XV5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.19□□□□□ -0.46
Chd8Q09XV5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm9463-201ENSMUST00000206707 601 ntBASIC12.19□□□□□ -0.46
Chd8Q09XV5 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.19□□□□□ -0.46
Chd8Q09XV5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm14109-201ENSMUST00000118814 309 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm13022-201ENSMUST00000121181 285 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm5369-201ENSMUST00000217499 588 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm11979-201ENSMUST00000119629 743 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Mir6546-201ENSMUST00000184460 62 ntBASIC12.18□□□□□ -0.46
Chd8Q09XV5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd8Q09XV5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms