Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tff1Q08423 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm12151-201ENSMUST00000121374 290 ntBASIC11.47□□□□□ -0.57
Tff1Q08423 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.47□□□□□ -0.57
Tff1Q08423 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.47□□□□□ -0.57
Tff1Q08423 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.47□□□□□ -0.57
Tff1Q08423 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.47□□□□□ -0.57
Tff1Q08423 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.47□□□□□ -0.57
Tff1Q08423 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tff1Q08423 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tff1Q08423 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tff1Q08423 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm25287-201ENSMUST00000103846 110 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 Gm22918-201ENSMUST00000103855 110 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm11543-201ENSMUST00000120758 370 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tff1Q08423 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.46□□□□□ -0.57
Tff1Q08423 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tff1Q08423 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.46□□□□□ -0.58
Tff1Q08423 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.46□□□□□ -0.58
Tff1Q08423 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Tff1Q08423 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tff1Q08423 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.45□□□□□ -0.58
Tff1Q08423 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.45□□□□□ -0.58
Tff1Q08423 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Tff1Q08423 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms