Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm29269-201ENSMUST00000190087 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21722-201ENSMUST00000190153 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm28423-201ENSMUST00000190701 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21899-201ENSMUST00000190745 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21910-201ENSMUST00000191163 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21849-201ENSMUST00000191571 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm28678-201ENSMUST00000191593 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm38294-201ENSMUST00000192831 381 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm20910-201ENSMUST00000193268 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21871-201ENSMUST00000194621 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.66□□□□□ -0.7
Cdx4Q07424 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm5566-201ENSMUST00000116118 459 ntBASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm12882-201ENSMUST00000121696 517 ntBASIC10.66□□□□□ -0.7
Cdx4Q07424 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm27680-201ENSMUST00000184192 160 ntBASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.66□□□□□ -0.7
Cdx4Q07424 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cdx4Q07424 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx4Q07424 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.65□□□□□ -0.7
Cdx4Q07424 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx4Q07424 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms