Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GabpaQ00422 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.58■□□□□ 0.08
GabpaQ00422 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GabpaQ00422 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.58■□□□□ 0.08
GabpaQ00422 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GabpaQ00422 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.58■□□□□ 0.08
GabpaQ00422 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GabpaQ00422 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GabpaQ00422 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GabpaQ00422 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GabpaQ00422 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
GabpaQ00422 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.57■□□□□ 0.08
GabpaQ00422 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12957-201ENSMUST00000117835 377 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12403-201ENSMUST00000121384 959 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Snora78-201ENSMUST00000158630 128 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Proscos-202ENSMUST00000178990 666 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.57■□□□□ 0.08
GabpaQ00422 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.57■□□□□ 0.08
GabpaQ00422 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.57■□□□□ 0.08
GabpaQ00422 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.57■□□□□ 0.08
GabpaQ00422 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GabpaQ00422 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.56■□□□□ 0.08
GabpaQ00422 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
GabpaQ00422 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Gm10156-201ENSMUST00000122364 462 ntBASIC15.56■□□□□ 0.08
GabpaQ00422 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.56■□□□□ 0.08
GabpaQ00422 Gm24644-201ENSMUST00000157114 139 ntBASIC15.56■□□□□ 0.08
GabpaQ00422 Mir1938-201ENSMUST00000158746 100 ntBASIC15.56■□□□□ 0.08
GabpaQ00422 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Gm27731-201ENSMUST00000185192 107 ntBASIC15.56■□□□□ 0.08
GabpaQ00422 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GabpaQ00422 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.56■□□□□ 0.08
GabpaQ00422 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.56■□□□□ 0.08
GabpaQ00422 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.56■□□□□ 0.08
GabpaQ00422 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.56■□□□□ 0.08
GabpaQ00422 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.56■□□□□ 0.08
GabpaQ00422 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
GabpaQ00422 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GabpaQ00422 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GabpaQ00422 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
GabpaQ00422 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GabpaQ00422 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GabpaQ00422 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.55■□□□□ 0.08
GabpaQ00422 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GabpaQ00422 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.55■□□□□ 0.08
GabpaQ00422 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms