Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Xrn1P97789 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Xrn1P97789 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Xrn1P97789 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Xrn1P97789 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.14■□□□□ 0.66
Xrn1P97789 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Xrn1P97789 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 CT009713.10-201ENSMUST00000225013 1986 ntBASIC19.14■□□□□ 0.65
Xrn1P97789 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Xrn1P97789 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Gm25700-201ENSMUST00000177693 110 ntBASIC19.14■□□□□ 0.65
Xrn1P97789 Gm27046-201ENSMUST00000182160 463 ntBASIC19.14■□□□□ 0.65
Xrn1P97789 Gm44967-201ENSMUST00000207047 631 ntBASIC19.14■□□□□ 0.65
Xrn1P97789 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Gm10782-202ENSMUST00000223775 1480 ntBASIC19.14■□□□□ 0.65
Xrn1P97789 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrn1P97789 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC19.13■□□□□ 0.65
Xrn1P97789 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Xrn1P97789 Gm43273-201ENSMUST00000199649 2594 ntBASIC19.13■□□□□ 0.65
Xrn1P97789 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Xrn1P97789 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Gm43399-201ENSMUST00000202546 2374 ntBASIC19.13■□□□□ 0.65
Xrn1P97789 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Gm14277-201ENSMUST00000121195 360 ntBASIC19.13■□□□□ 0.65
Xrn1P97789 Gm22334-201ENSMUST00000158070 133 ntBASIC19.13■□□□□ 0.65
Xrn1P97789 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC19.13■□□□□ 0.65
Xrn1P97789 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Xrn1P97789 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrn1P97789 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Xrn1P97789 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.13■□□□□ 0.65
Xrn1P97789 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Xrn1P97789 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Xrn1P97789 Gm38157-201ENSMUST00000194178 1698 ntBASIC19.12■□□□□ 0.65
Xrn1P97789 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC19.12■□□□□ 0.65
Xrn1P97789 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Xrn1P97789 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.12■□□□□ 0.65
Xrn1P97789 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC19.12■□□□□ 0.65
Xrn1P97789 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Gm5950-201ENSMUST00000213337 772 ntBASIC19.12■□□□□ 0.65
Xrn1P97789 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC19.12■□□□□ 0.65
Xrn1P97789 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.12■□□□□ 0.65
Xrn1P97789 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xrn1P97789 Gm4909-201ENSMUST00000118749 794 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC19.11■□□□□ 0.65
Xrn1P97789 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC19.11■□□□□ 0.65
Xrn1P97789 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Xrn1P97789 Gm9333-201ENSMUST00000205452 1323 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Xrn1P97789 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Xrn1P97789 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Xrn1P97789 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC19.11■□□□□ 0.65
Xrn1P97789 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 Gm44262-201ENSMUST00000204969 372 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 Gm13097-201ENSMUST00000210722 397 ntBASIC19.11■□□□□ 0.65
Xrn1P97789 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms