Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.04□□□□□ -0.32
Nkx3-2P97503 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.04□□□□□ -0.32
Nkx3-2P97503 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Gm18624-201ENSMUST00000220966 658 ntBASIC13.04□□□□□ -0.32
Nkx3-2P97503 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.04□□□□□ -0.32
Nkx3-2P97503 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx3-2P97503 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.03□□□□□ -0.32
Nkx3-2P97503 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Gm6912-201ENSMUST00000117218 544 ntBASIC13.03□□□□□ -0.32
Nkx3-2P97503 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Gm37714-201ENSMUST00000194742 342 ntBASIC13.03□□□□□ -0.32
Nkx3-2P97503 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Gm7653-201ENSMUST00000214567 508 ntBASIC13.03□□□□□ -0.32
Nkx3-2P97503 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.03□□□□□ -0.32
Nkx3-2P97503 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx3-2P97503 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.02□□□□□ -0.32
Nkx3-2P97503 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx3-2P97503 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Gm15240-201ENSMUST00000118156 720 ntBASIC13.02□□□□□ -0.33
Nkx3-2P97503 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.02□□□□□ -0.33
Nkx3-2P97503 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Gm5279-201ENSMUST00000199575 745 ntBASIC13.02□□□□□ -0.33
Nkx3-2P97503 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx3-2P97503 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms