Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim43cP86449 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Trim43cP86449 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim43cP86449 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim43cP86449 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim43cP86449 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim43cP86449 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim43cP86449 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43cP86449 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.96□□□□□ -0.02
Trim43cP86449 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43cP86449 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim43cP86449 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim43cP86449 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Gm17795-201ENSMUST00000214505 757 ntBASIC14.95□□□□□ -0.02
Trim43cP86449 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Gm9797-201ENSMUST00000052902 613 ntBASIC14.95□□□□□ -0.02
Trim43cP86449 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43cP86449 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43cP86449 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Trim43cP86449 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim43cP86449 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trim43cP86449 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim43cP86449 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim43cP86449 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim43cP86449 Gm42612-201ENSMUST00000197986 623 ntBASIC14.94□□□□□ -0.02
Trim43cP86449 Gm43170-201ENSMUST00000199827 612 ntBASIC14.94□□□□□ -0.02
Trim43cP86449 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.94□□□□□ -0.02
Trim43cP86449 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms