Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm27437-201ENSMUST00000183429 107 ntBASIC12.27□□□□□ -0.45
H3f3aP84244 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H3f3aP84244 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H3f3aP84244 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H3f3aP84244 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
H3f3aP84244 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
H3f3aP84244 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
H3f3aP84244 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
H3f3aP84244 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.26□□□□□ -0.45
H3f3aP84244 Mir6977-201ENSMUST00000184960 64 ntBASIC12.26□□□□□ -0.45
H3f3aP84244 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.26□□□□□ -0.45
H3f3aP84244 Gm17795-201ENSMUST00000214505 757 ntBASIC12.26□□□□□ -0.45
H3f3aP84244 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
H3f3aP84244 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
H3f3aP84244 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.26□□□□□ -0.45
H3f3aP84244 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H3f3aP84244 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.26□□□□□ -0.45
H3f3aP84244 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H3f3aP84244 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
H3f3aP84244 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.25□□□□□ -0.45
H3f3aP84244 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.25□□□□□ -0.45
H3f3aP84244 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H3f3aP84244 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.25□□□□□ -0.45
H3f3aP84244 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.25□□□□□ -0.45
H3f3aP84244 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.25□□□□□ -0.45
H3f3aP84244 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.25□□□□□ -0.45
H3f3aP84244 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.25□□□□□ -0.45
H3f3aP84244 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.25□□□□□ -0.45
H3f3aP84244 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.25□□□□□ -0.45
H3f3aP84244 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.25□□□□□ -0.45
H3f3aP84244 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.25□□□□□ -0.45
H3f3aP84244 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H3f3aP84244 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.25□□□□□ -0.45
H3f3aP84244 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H3f3aP84244 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms