Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SgcdP82347 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.8□□□□□ -0.36
SgcdP82347 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgcdP82347 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.8□□□□□ -0.36
SgcdP82347 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgcdP82347 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.8□□□□□ -0.36
SgcdP82347 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.8□□□□□ -0.36
SgcdP82347 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SgcdP82347 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcdP82347 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.79□□□□□ -0.36
SgcdP82347 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcdP82347 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcdP82347 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SgcdP82347 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcdP82347 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.79□□□□□ -0.36
SgcdP82347 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SgcdP82347 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
SgcdP82347 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcdP82347 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcdP82347 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SgcdP82347 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcdP82347 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.78□□□□□ -0.36
SgcdP82347 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcdP82347 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
SgcdP82347 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcdP82347 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.78□□□□□ -0.36
SgcdP82347 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcdP82347 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms